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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015886458.1_cds_XP_016440599.1_36041
CDS Infomation

[gene=LOC107766345] [db_xref=GeneID:107766345] [protein=protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5-like] [protein_id=XP_016440599.1] [location=complement(join(13841..14632,15165..15305,15541..15616,16170..16279,17344..17444,17532..17625))] [gbkey=CDS]
Sequence

ATGTCGAAGGAGAACGAACCGGCAAAGCTGCTATTACCTTACCTTCAACGCGCCGATGAG
TTGCAGAAACACGAACCCCTCGTTGCCTACTACTGTCGGTTGTACGCAATGGAGCGAGGG
TTGAAGATTCCTCAAAAAGAGCGTACAAAGACCACTAATTCCCTCCTTGTCTCCCTTATT
AATCAACTCGAAAAGGATAAGAAGTCACTGGAATTGGGGCCCGATGATCATTTGCATGTG
GAGGGATTTGCCTTGAATGTTTTTGCAAAGGCAGATAAACAAGATCGAGCTGGGCGAGCA
GACTTGAATACAGCGAAGACATTTTATGCCGCGAGTATCTTTTTTGAGATCCTTAATCAG
TTTGGTGAACTCCAGCCAGATCTTGAGCAGAAACAGAAGTATGCAGCTTGGAAGGCAGCA
GATATAAGGAAAGCTTTGAAAGAAGGAAGGAAGCCTGTACCAGGCCCTCCTGGTGATGAA
AGAGATATTTCGGAGCTGTCCAGTGCACAAAATGATACATATGATCTTCAACCTGGTGGA
ACTGATTCAGTCATCAAACCCGCACCAGAATCCGATTCAGTCATCAAACCTGGACCAGAA
TCCGATTCATTTAGTCACGTACATGACGATGCACATTATTCTGCAAATAGACCGTCTCCT
CCAGCAGCCACCCCACCACCTCCTCCTTCACGTGTCCCTCCGTCACCTCCGGCAGCCACC
ACACCAACTCCTCCACATATCCCTCCATCACCTCCTTCATATTTTAGTGATGAGTATCCT
TCTCATAATGACTATTCTTCTCATAATTTCCAGCAGACTCCATCAGTTAATATATCTGAA
AATCTGTCTTACTCTCCGTCGTATCACCATCAACCTTATGTGCAAGAACCACAGTCTCAC
TTGCCACAGCACTACCCTTCGCATGATGTTCCCTCGTATTCATATCCCAATTTCCAGTCA
TATCCTAGCTTTATGGAGAGCAGCCTTCCTTCTGCGCCATCACATAACCCTTCTTACTAC
CAAGGCGCTGATGCTTCGTATTCCACATTGGCCTCATCAAGCACTGCAAACTTTTCATCA
AACGCTCAACACAGCTCAAGTGAGAGAAATGGGACTGCATCACAAGCTGCAGCTGCTCCC
ACTAAATCATATGAGTACGACAGCAATTACCAGCCTCCTCCGGATAAAATAGCTGAAGCA
CACAAGGCTGCAAGGTTTGCTGTTGGGGCTCTGGCATTTGATGATGTCTCTATCGCCGTA
GACTACCTCAAAAAATCACTTGAGCTGTTAACAAACCCATCAGCTGATCAATGA

Peptide Sequence

PEP ID

XP_016440599.1
PEP Infomation

PREDICTED: protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5-like [Nicotiana tabacum]
Sequence

MSKENEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQKERTKTTNSLLVSLI
NQLEKDKKSLELGPDDHLHVEGFALNVFAKADKQDRAGRADLNTAKTFYAASIFFEILNQ
FGELQPDLEQKQKYAAWKAADIRKALKEGRKPVPGPPGDERDISELSSAQNDTYDLQPGG
TDSVIKPAPESDSVIKPGPESDSFSHVHDDAHYSANRPSPPAATPPPPPSRVPPSPPAAT
TPTPPHIPPSPPSYFSDEYPSHNDYSSHNFQQTPSVNISENLSYSPSYHHQPYVQEPQSH
LPQHYPSHDVPSYSYPNFQSYPSFMESSLPSAPSHNPSYYQGADASYSTLASSSTANFSS
NAQHSSSERNGTASQAAAAPTKSYEYDSNYQPPPDKIAEAHKAARFAVGALAFDDVSIAV
DYLKKSLELLTNPSADQ

Transcript Sequence

Gene sequence data has not been registered.